Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops3O88543 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cops3O88543 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops3O88543 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cops3O88543 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops3O88543 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops3O88543 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cops3O88543 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops3O88543 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cops3O88543 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cops3O88543 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cops3O88543 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops3O88543 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cops3O88543 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
Cops3O88543 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.12■□□□□ 0.33
Cops3O88543 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.12■□□□□ 0.33
Cops3O88543 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.12■□□□□ 0.33
Cops3O88543 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cops3O88543 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops3O88543 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.12■□□□□ 0.33
Cops3O88543 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.11■□□□□ 0.33
Cops3O88543 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cops3O88543 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.11■□□□□ 0.33
Cops3O88543 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Cops3O88543 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Cops3O88543 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Cops3O88543 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.11■□□□□ 0.33
Cops3O88543 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops3O88543 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cops3O88543 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.1■□□□□ 0.33
Cops3O88543 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.1■□□□□ 0.33
Cops3O88543 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.1■□□□□ 0.33
Cops3O88543 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Cops3O88543 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops3O88543 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
Cops3O88543 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cops3O88543 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cops3O88543 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
Cops3O88543 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.09■□□□□ 0.33
Cops3O88543 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.09■□□□□ 0.33
Cops3O88543 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cops3O88543 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cops3O88543 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cops3O88543 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cops3O88543 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cops3O88543 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cops3O88543 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.08■□□□□ 0.33
Cops3O88543 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.08■□□□□ 0.33
Cops3O88543 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.08■□□□□ 0.32
Cops3O88543 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops3O88543 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Cops3O88543 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops3O88543 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops3O88543 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cops3O88543 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms