Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.24■□□□□ 0.99
IkbkbO88351 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.24■□□□□ 0.99
IkbkbO88351 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IkbkbO88351 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IkbkbO88351 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
IkbkbO88351 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IkbkbO88351 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.23■□□□□ 0.99
IkbkbO88351 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IkbkbO88351 Gm5874-201ENSMUST00000096101 508 ntBASIC21.23■□□□□ 0.99
IkbkbO88351 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
IkbkbO88351 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.23■□□□□ 0.99
IkbkbO88351 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IkbkbO88351 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IkbkbO88351 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.23■□□□□ 0.99
IkbkbO88351 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
IkbkbO88351 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IkbkbO88351 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.22■□□□□ 0.99
IkbkbO88351 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
IkbkbO88351 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
IkbkbO88351 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IkbkbO88351 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IkbkbO88351 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
IkbkbO88351 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
IkbkbO88351 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.21■□□□□ 0.99
IkbkbO88351 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
IkbkbO88351 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
IkbkbO88351 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.21■□□□□ 0.99
IkbkbO88351 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
IkbkbO88351 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.21■□□□□ 0.99
IkbkbO88351 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.21■□□□□ 0.99
IkbkbO88351 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IkbkbO88351 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
IkbkbO88351 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IkbkbO88351 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
IkbkbO88351 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IkbkbO88351 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IkbkbO88351 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IkbkbO88351 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IkbkbO88351 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
IkbkbO88351 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
IkbkbO88351 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IkbkbO88351 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
IkbkbO88351 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.18■□□□□ 0.98
IkbkbO88351 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
IkbkbO88351 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.18■□□□□ 0.98
IkbkbO88351 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
IkbkbO88351 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IkbkbO88351 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IkbkbO88351 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.18■□□□□ 0.98
IkbkbO88351 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 Gm10493-201ENSMUST00000097270 612 ntBASIC21.17■□□□□ 0.98
IkbkbO88351 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.17■□□□□ 0.98
IkbkbO88351 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IkbkbO88351 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IkbkbO88351 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.16■□□□□ 0.98
IkbkbO88351 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.16■□□□□ 0.98
IkbkbO88351 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
IkbkbO88351 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IkbkbO88351 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IkbkbO88351 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
IkbkbO88351 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
IkbkbO88351 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.15■□□□□ 0.98
IkbkbO88351 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IkbkbO88351 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
IkbkbO88351 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.14■□□□□ 0.98
IkbkbO88351 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IkbkbO88351 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.14■□□□□ 0.97
IkbkbO88351 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
IkbkbO88351 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IkbkbO88351 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
IkbkbO88351 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IkbkbO88351 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms