Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.34■■□□□ 1.01
Stra6O70491 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Stra6O70491 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.34■■□□□ 1.01
Stra6O70491 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Stra6O70491 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Stra6O70491 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stra6O70491 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Stra6O70491 Gm12527-201ENSMUST00000117967 564 ntBASIC21.33■■□□□ 1.01
Stra6O70491 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Stra6O70491 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Stra6O70491 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Stra6O70491 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Stra6O70491 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
Stra6O70491 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Stra6O70491 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Stra6O70491 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Stra6O70491 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Stra6O70491 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Stra6O70491 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Stra6O70491 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stra6O70491 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Stra6O70491 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stra6O70491 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stra6O70491 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.31■■□□□ 1
Stra6O70491 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Stra6O70491 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stra6O70491 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stra6O70491 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stra6O70491 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Stra6O70491 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Stra6O70491 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Stra6O70491 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.3■■□□□ 1
Stra6O70491 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.3■■□□□ 1
Stra6O70491 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Stra6O70491 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Stra6O70491 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.3■■□□□ 1
Stra6O70491 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Stra6O70491 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.29■■□□□ 1
Stra6O70491 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Stra6O70491 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stra6O70491 Gm6211-202ENSMUST00000167849 925 ntBASIC21.28■■□□□ 1
Stra6O70491 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.28■■□□□ 1
Stra6O70491 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.28■■□□□ 1
Stra6O70491 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stra6O70491 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stra6O70491 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Stra6O70491 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.27■■□□□ 1
Stra6O70491 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Stra6O70491 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.27■■□□□ 1
Stra6O70491 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.27■■□□□ 1
Stra6O70491 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.27■■□□□ 1
Stra6O70491 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.27■■□□□ 1
Stra6O70491 Gm5408-201ENSMUST00000197998 747 ntBASIC21.27■■□□□ 1
Stra6O70491 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Stra6O70491 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.27■■□□□ 1
Stra6O70491 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stra6O70491 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Stra6O70491 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Stra6O70491 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.27■■□□□ 1
Stra6O70491 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Stra6O70491 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Stra6O70491 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Stra6O70491 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Stra6O70491 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.26■□□□□ 0.99
Stra6O70491 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.26■□□□□ 0.99
Stra6O70491 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Stra6O70491 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.26■□□□□ 0.99
Stra6O70491 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.26■□□□□ 0.99
Stra6O70491 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.26■□□□□ 0.99
Stra6O70491 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Stra6O70491 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Stra6O70491 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
Stra6O70491 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Stra6O70491 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Stra6O70491 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Stra6O70491 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Stra6O70491 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Stra6O70491 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.25■□□□□ 0.99
Stra6O70491 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Stra6O70491 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.25■□□□□ 0.99
Stra6O70491 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms