Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tspan6O70401 Gm13148-201ENSMUST00000118892 745 ntBASIC18.77■□□□□ 0.6
Tspan6O70401 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tspan6O70401 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tspan6O70401 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tspan6O70401 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tspan6O70401 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tspan6O70401 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tspan6O70401 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.76■□□□□ 0.59
Tspan6O70401 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.76■□□□□ 0.59
Tspan6O70401 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.76■□□□□ 0.59
Tspan6O70401 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.76■□□□□ 0.59
Tspan6O70401 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tspan6O70401 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.75■□□□□ 0.59
Tspan6O70401 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tspan6O70401 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Tspan6O70401 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.75■□□□□ 0.59
Tspan6O70401 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Tspan6O70401 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.75■□□□□ 0.59
Tspan6O70401 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.75■□□□□ 0.59
Tspan6O70401 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.75■□□□□ 0.59
Tspan6O70401 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tspan6O70401 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.74■□□□□ 0.59
Tspan6O70401 Gm6211-202ENSMUST00000167849 925 ntBASIC18.74■□□□□ 0.59
Tspan6O70401 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.74■□□□□ 0.59
Tspan6O70401 Gm5408-201ENSMUST00000197998 747 ntBASIC18.74■□□□□ 0.59
Tspan6O70401 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tspan6O70401 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tspan6O70401 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Tspan6O70401 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.73■□□□□ 0.59
Tspan6O70401 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Tspan6O70401 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tspan6O70401 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
Tspan6O70401 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tspan6O70401 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Tspan6O70401 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Tspan6O70401 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tspan6O70401 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.71■□□□□ 0.59
Tspan6O70401 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tspan6O70401 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tspan6O70401 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tspan6O70401 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tspan6O70401 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Tspan6O70401 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tspan6O70401 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Tspan6O70401 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.7■□□□□ 0.58
Tspan6O70401 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Tspan6O70401 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tspan6O70401 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tspan6O70401 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tspan6O70401 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tspan6O70401 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tspan6O70401 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms