Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.97■□□□□ 0.63
Pdlim1O70400 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.97■□□□□ 0.63
Pdlim1O70400 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Pdlim1O70400 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
Pdlim1O70400 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim1O70400 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pdlim1O70400 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pdlim1O70400 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.96■□□□□ 0.63
Pdlim1O70400 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Pdlim1O70400 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.96■□□□□ 0.63
Pdlim1O70400 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.96■□□□□ 0.63
Pdlim1O70400 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.96■□□□□ 0.63
Pdlim1O70400 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Pdlim1O70400 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Gm9988-201ENSMUST00000069786 435 ntBASIC18.96■□□□□ 0.63
Pdlim1O70400 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pdlim1O70400 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim1O70400 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pdlim1O70400 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pdlim1O70400 Gm5874-201ENSMUST00000096101 508 ntBASIC18.95■□□□□ 0.62
Pdlim1O70400 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Pdlim1O70400 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim1O70400 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pdlim1O70400 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Gm7860-201ENSMUST00000121190 879 ntBASIC18.94■□□□□ 0.62
Pdlim1O70400 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pdlim1O70400 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pdlim1O70400 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim1O70400 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.93■□□□□ 0.62
Pdlim1O70400 Gm8495-201ENSMUST00000188740 694 ntBASIC18.93■□□□□ 0.62
Pdlim1O70400 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Pdlim1O70400 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.93■□□□□ 0.62
Pdlim1O70400 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.93■□□□□ 0.62
Pdlim1O70400 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.93■□□□□ 0.62
Pdlim1O70400 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim1O70400 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim1O70400 Iqck-206ENSMUST00000208658 2891 ntBASIC18.92■□□□□ 0.62
Pdlim1O70400 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim1O70400 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Pdlim1O70400 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim1O70400 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pdlim1O70400 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim1O70400 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim1O70400 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pdlim1O70400 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Pdlim1O70400 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim1O70400 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim1O70400 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Pdlim1O70400 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim1O70400 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pdlim1O70400 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdlim1O70400 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim1O70400 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim1O70400 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Pdlim1O70400 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pdlim1O70400 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pdlim1O70400 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim1O70400 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms