Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pja1O55176 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pja1O55176 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Pja1O55176 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.28■□□□□ 0.84
Pja1O55176 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pja1O55176 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pja1O55176 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pja1O55176 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pja1O55176 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pja1O55176 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pja1O55176 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pja1O55176 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pja1O55176 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pja1O55176 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pja1O55176 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.27■□□□□ 0.84
Pja1O55176 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pja1O55176 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pja1O55176 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.27■□□□□ 0.84
Pja1O55176 Golgb1-201ENSMUST00000023534 498 ntBASIC20.27■□□□□ 0.84
Pja1O55176 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pja1O55176 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.27■□□□□ 0.84
Pja1O55176 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.26■□□□□ 0.83
Pja1O55176 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Pja1O55176 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pja1O55176 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pja1O55176 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pja1O55176 Gm14117-201ENSMUST00000122417 843 ntBASIC20.26■□□□□ 0.83
Pja1O55176 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pja1O55176 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.26■□□□□ 0.83
Pja1O55176 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pja1O55176 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pja1O55176 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.25■□□□□ 0.83
Pja1O55176 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pja1O55176 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pja1O55176 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pja1O55176 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pja1O55176 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pja1O55176 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.24■□□□□ 0.83
Pja1O55176 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pja1O55176 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pja1O55176 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pja1O55176 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pja1O55176 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pja1O55176 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.23■□□□□ 0.83
Pja1O55176 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Pja1O55176 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pja1O55176 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pja1O55176 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pja1O55176 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pja1O55176 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pja1O55176 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.22■□□□□ 0.83
Pja1O55176 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.22■□□□□ 0.83
Pja1O55176 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pja1O55176 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pja1O55176 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pja1O55176 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.2■□□□□ 0.82
Pja1O55176 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pja1O55176 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pja1O55176 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Pja1O55176 Gm12922-201ENSMUST00000120626 809 ntBASIC20.2■□□□□ 0.82
Pja1O55176 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.2■□□□□ 0.82
Pja1O55176 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pja1O55176 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pja1O55176 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pja1O55176 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pja1O55176 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pja1O55176 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pja1O55176 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Pja1O55176 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pja1O55176 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pja1O55176 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms