Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.01■□□□□ 0.79
Cldn5O54942 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Cldn5O54942 Gm7514-201ENSMUST00000209475 934 ntBASIC20.01■□□□□ 0.79
Cldn5O54942 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.01■□□□□ 0.79
Cldn5O54942 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cldn5O54942 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Gm13146-201ENSMUST00000118508 780 ntBASIC20■□□□□ 0.79
Cldn5O54942 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Gm32699-201ENSMUST00000221728 1988 ntBASIC20■□□□□ 0.79
Cldn5O54942 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cldn5O54942 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn5O54942 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cldn5O54942 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cldn5O54942 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn5O54942 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn5O54942 Gm7860-201ENSMUST00000121190 879 ntBASIC19.99■□□□□ 0.79
Cldn5O54942 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn5O54942 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.99■□□□□ 0.79
Cldn5O54942 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn5O54942 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn5O54942 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Cldn5O54942 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn5O54942 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn5O54942 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn5O54942 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Cldn5O54942 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.98■□□□□ 0.79
Cldn5O54942 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.98■□□□□ 0.79
Cldn5O54942 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Cldn5O54942 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn5O54942 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn5O54942 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn5O54942 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cldn5O54942 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Cldn5O54942 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cldn5O54942 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.97■□□□□ 0.79
Cldn5O54942 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cldn5O54942 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn5O54942 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cldn5O54942 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn5O54942 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cldn5O54942 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn5O54942 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.95■□□□□ 0.78
Cldn5O54942 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn5O54942 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn5O54942 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn5O54942 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Cldn5O54942 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Cldn5O54942 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn5O54942 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn5O54942 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.93■□□□□ 0.78
Cldn5O54942 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn5O54942 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn5O54942 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn5O54942 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn5O54942 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn5O54942 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn5O54942 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms