Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DffbO54788 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.42■□□□□ 0.22
DffbO54788 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.42■□□□□ 0.22
DffbO54788 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.42■□□□□ 0.22
DffbO54788 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DffbO54788 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
DffbO54788 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.41■□□□□ 0.22
DffbO54788 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.41■□□□□ 0.22
DffbO54788 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DffbO54788 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.41■□□□□ 0.22
DffbO54788 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.41■□□□□ 0.22
DffbO54788 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DffbO54788 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DffbO54788 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DffbO54788 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DffbO54788 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.4■□□□□ 0.22
DffbO54788 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DffbO54788 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DffbO54788 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DffbO54788 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
DffbO54788 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DffbO54788 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DffbO54788 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DffbO54788 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DffbO54788 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.38■□□□□ 0.21
DffbO54788 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DffbO54788 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.38■□□□□ 0.21
DffbO54788 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
DffbO54788 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.38■□□□□ 0.21
DffbO54788 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DffbO54788 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DffbO54788 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DffbO54788 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DffbO54788 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DffbO54788 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.38■□□□□ 0.21
DffbO54788 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.38■□□□□ 0.21
DffbO54788 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DffbO54788 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DffbO54788 Rarb-207ENSMUST00000225921 2756 ntBASIC16.37■□□□□ 0.21
DffbO54788 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DffbO54788 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.37■□□□□ 0.21
DffbO54788 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DffbO54788 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
DffbO54788 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.37■□□□□ 0.21
DffbO54788 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.37■□□□□ 0.21
DffbO54788 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DffbO54788 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
DffbO54788 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DffbO54788 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
DffbO54788 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
DffbO54788 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DffbO54788 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.35■□□□□ 0.21
DffbO54788 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms