Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.35■□□□□ 0.53
Clk4O35493 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.35■□□□□ 0.53
Clk4O35493 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Clk4O35493 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.35■□□□□ 0.53
Clk4O35493 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clk4O35493 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clk4O35493 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clk4O35493 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clk4O35493 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clk4O35493 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.34■□□□□ 0.53
Clk4O35493 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.34■□□□□ 0.53
Clk4O35493 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Clk4O35493 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk4O35493 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clk4O35493 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk4O35493 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk4O35493 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk4O35493 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.33■□□□□ 0.53
Clk4O35493 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk4O35493 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk4O35493 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk4O35493 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk4O35493 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk4O35493 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.32■□□□□ 0.52
Clk4O35493 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.32■□□□□ 0.52
Clk4O35493 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clk4O35493 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.32■□□□□ 0.52
Clk4O35493 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk4O35493 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clk4O35493 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.31■□□□□ 0.52
Clk4O35493 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Clk4O35493 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clk4O35493 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Clk4O35493 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.31■□□□□ 0.52
Clk4O35493 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.31■□□□□ 0.52
Clk4O35493 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk4O35493 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clk4O35493 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.3■□□□□ 0.52
Clk4O35493 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.3■□□□□ 0.52
Clk4O35493 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.3■□□□□ 0.52
Clk4O35493 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Clk4O35493 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk4O35493 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk4O35493 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.29■□□□□ 0.52
Clk4O35493 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clk4O35493 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clk4O35493 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.29■□□□□ 0.52
Clk4O35493 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk4O35493 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clk4O35493 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk4O35493 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk4O35493 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clk4O35493 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.28■□□□□ 0.52
Clk4O35493 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clk4O35493 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clk4O35493 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms