Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Capn1O35350 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Capn1O35350 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.71■□□□□ 0.43
Capn1O35350 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Capn1O35350 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Capn1O35350 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Capn1O35350 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Capn1O35350 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Capn1O35350 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Capn1O35350 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Capn1O35350 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.7■□□□□ 0.42
Capn1O35350 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capn1O35350 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.7■□□□□ 0.42
Capn1O35350 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.7■□□□□ 0.42
Capn1O35350 Gm42778-201ENSMUST00000199644 553 ntBASIC17.7■□□□□ 0.42
Capn1O35350 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capn1O35350 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Capn1O35350 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capn1O35350 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capn1O35350 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Capn1O35350 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.69■□□□□ 0.42
Capn1O35350 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Capn1O35350 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Capn1O35350 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Capn1O35350 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capn1O35350 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Capn1O35350 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Capn1O35350 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Capn1O35350 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.68■□□□□ 0.42
Capn1O35350 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Capn1O35350 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capn1O35350 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Capn1O35350 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Capn1O35350 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Capn1O35350 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capn1O35350 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.67■□□□□ 0.42
Capn1O35350 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Capn1O35350 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capn1O35350 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capn1O35350 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.67■□□□□ 0.42
Capn1O35350 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capn1O35350 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.67■□□□□ 0.42
Capn1O35350 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.66■□□□□ 0.42
Capn1O35350 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Capn1O35350 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
Capn1O35350 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Capn1O35350 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capn1O35350 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
Capn1O35350 Golph3-202ENSMUST00000226517 2359 ntBASIC17.66■□□□□ 0.42
Capn1O35350 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.66■□□□□ 0.42
Capn1O35350 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Capn1O35350 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.65■□□□□ 0.42
Capn1O35350 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.65■□□□□ 0.42
Capn1O35350 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.65■□□□□ 0.42
Capn1O35350 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Capn1O35350 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.65■□□□□ 0.42
Capn1O35350 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capn1O35350 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Capn1O35350 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Capn1O35350 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Capn1O35350 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Capn1O35350 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.64■□□□□ 0.41
Capn1O35350 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Capn1O35350 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms