Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm10616-201ENSMUST00000205285 2127 ntBASIC18■□□□□ 0.47
Cx3cl1O35188 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cl1O35188 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cl1O35188 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.98■□□□□ 0.47
Cx3cl1O35188 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cl1O35188 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cx3cl1O35188 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Gm18284-201ENSMUST00000172604 624 ntBASIC17.97■□□□□ 0.47
Cx3cl1O35188 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cx3cl1O35188 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cx3cl1O35188 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.97■□□□□ 0.47
Cx3cl1O35188 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cx3cl1O35188 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cl1O35188 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cl1O35188 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.96■□□□□ 0.47
Cx3cl1O35188 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Gm10493-201ENSMUST00000097270 612 ntBASIC17.96■□□□□ 0.47
Cx3cl1O35188 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cx3cl1O35188 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cx3cl1O35188 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.95■□□□□ 0.46
Cx3cl1O35188 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.95■□□□□ 0.46
Cx3cl1O35188 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cl1O35188 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.94■□□□□ 0.46
Cx3cl1O35188 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cx3cl1O35188 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cx3cl1O35188 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.92■□□□□ 0.46
Cx3cl1O35188 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cl1O35188 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cl1O35188 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cl1O35188 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cl1O35188 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms