Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Alx4O35137 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.1■□□□□ 0.33
Alx4O35137 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx4O35137 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Alx4O35137 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Alx4O35137 Serp2-204ENSMUST00000228055 705 ntBASIC17.1■□□□□ 0.33
Alx4O35137 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx4O35137 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx4O35137 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Alx4O35137 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Alx4O35137 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Alx4O35137 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
Alx4O35137 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.09■□□□□ 0.33
Alx4O35137 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Alx4O35137 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Alx4O35137 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Alx4O35137 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Alx4O35137 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx4O35137 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Alx4O35137 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx4O35137 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx4O35137 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx4O35137 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Alx4O35137 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.08■□□□□ 0.32
Alx4O35137 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Alx4O35137 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.08■□□□□ 0.32
Alx4O35137 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx4O35137 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.07■□□□□ 0.32
Alx4O35137 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Alx4O35137 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Alx4O35137 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Alx4O35137 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Gm15820-201ENSMUST00000201566 728 ntBASIC17.07■□□□□ 0.32
Alx4O35137 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx4O35137 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.07■□□□□ 0.32
Alx4O35137 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Alx4O35137 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Alx4O35137 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Alx4O35137 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.06■□□□□ 0.32
Alx4O35137 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
Alx4O35137 Gm22238-201ENSMUST00000175222 88 ntBASIC17.06■□□□□ 0.32
Alx4O35137 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Alx4O35137 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
Alx4O35137 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Alx4O35137 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Alx4O35137 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx4O35137 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.05■□□□□ 0.32
Alx4O35137 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.05■□□□□ 0.32
Alx4O35137 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Alx4O35137 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx4O35137 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.05■□□□□ 0.32
Alx4O35137 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx4O35137 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx4O35137 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx4O35137 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms