Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Gm8495-201ENSMUST00000188740 694 ntBASIC14.67□□□□□ -0.06
Gm10553J3QPF1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.67□□□□□ -0.06
Gm10553J3QPF1 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.67□□□□□ -0.06
Gm10553J3QPF1 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm10553J3QPF1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm10553J3QPF1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm10553J3QPF1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm10553J3QPF1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Gm42778-201ENSMUST00000199644 553 ntBASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm10553J3QPF1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Gm42642-201ENSMUST00000200683 355 ntBASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm10553J3QPF1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Reep4-203ENSMUST00000226563 1444 ntBASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm10553J3QPF1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm10553J3QPF1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms