Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-3J3QMG8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-3J3QMG8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-3J3QMG8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Gm27801-201ENSMUST00000184174 223 ntBASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-3J3QMG8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav13d-3J3QMG8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13d-3J3QMG8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav13d-3J3QMG8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms