Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm1E9Q9Q2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.2■□□□□ 0.98
R3hdm1E9Q9Q2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.2■□□□□ 0.98
R3hdm1E9Q9Q2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
R3hdm1E9Q9Q2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm1E9Q9Q2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.2■□□□□ 0.98
R3hdm1E9Q9Q2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
R3hdm1E9Q9Q2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Gm6365-201ENSMUST00000054711 744 ntBASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm1E9Q9Q2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3hdm1E9Q9Q2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Gm7290-201ENSMUST00000104990 617 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Gm12918-201ENSMUST00000120234 636 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Gm15710-201ENSMUST00000121821 636 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Gm5075-201ENSMUST00000196916 622 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3hdm1E9Q9Q2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3hdm1E9Q9Q2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
R3hdm1E9Q9Q2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
R3hdm1E9Q9Q2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
R3hdm1E9Q9Q2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
R3hdm1E9Q9Q2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.14■□□□□ 0.98
R3hdm1E9Q9Q2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Gm37856-201ENSMUST00000191634 999 ntBASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
R3hdm1E9Q9Q2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
R3hdm1E9Q9Q2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3hdm1E9Q9Q2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.12■□□□□ 0.97
R3hdm1E9Q9Q2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3hdm1E9Q9Q2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms