Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ccdc141E9Q8Q6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC29.33■■■□□ 2.29
Ccdc141E9Q8Q6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Ccdc141E9Q8Q6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc141E9Q8Q6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc141E9Q8Q6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc141E9Q8Q6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Ccdc141E9Q8Q6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ccdc141E9Q8Q6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 Gm37055-201ENSMUST00000191866 133 ntBASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ccdc141E9Q8Q6 Gm15565-201ENSMUST00000118890 427 ntBASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Gm9484-201ENSMUST00000195892 1159 ntBASIC29.3■■■□□ 2.28
Ccdc141E9Q8Q6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ccdc141E9Q8Q6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ccdc141E9Q8Q6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Ccdc141E9Q8Q6 Gm18666-201ENSMUST00000190039 958 ntBASIC29.29■■■□□ 2.28
Ccdc141E9Q8Q6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ccdc141E9Q8Q6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ccdc141E9Q8Q6 Gm2399-201ENSMUST00000104944 225 ntBASIC29.28■■■□□ 2.28
Ccdc141E9Q8Q6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ccdc141E9Q8Q6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC29.28■■■□□ 2.28
Ccdc141E9Q8Q6 Gm44549-201ENSMUST00000208351 577 ntBASIC29.28■■■□□ 2.28
Ccdc141E9Q8Q6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ccdc141E9Q8Q6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Ccdc141E9Q8Q6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc141E9Q8Q6 AL672049.1-201ENSMUST00000197943 91 ntBASIC29.26■■■□□ 2.27
Ccdc141E9Q8Q6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc141E9Q8Q6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc141E9Q8Q6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc141E9Q8Q6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Gm26971-201ENSMUST00000182423 1072 ntBASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 AC154649.1-201ENSMUST00000227392 384 ntBASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC29.25■■■□□ 2.27
Ccdc141E9Q8Q6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
Ccdc141E9Q8Q6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
Ccdc141E9Q8Q6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
Ccdc141E9Q8Q6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC29.22■■■□□ 2.27
Ccdc141E9Q8Q6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ccdc141E9Q8Q6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ccdc141E9Q8Q6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC29.21■■■□□ 2.27
Ccdc141E9Q8Q6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Ccdc141E9Q8Q6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Ccdc141E9Q8Q6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ccdc141E9Q8Q6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC29.2■■■□□ 2.27
Ccdc141E9Q8Q6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ccdc141E9Q8Q6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ccdc141E9Q8Q6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ccdc141E9Q8Q6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ccdc141E9Q8Q6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc141E9Q8Q6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC29.19■■■□□ 2.26
Ccdc141E9Q8Q6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc141E9Q8Q6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc141E9Q8Q6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc141E9Q8Q6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Nrn1-203ENSMUST00000223611 1443 ntBASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ccdc141E9Q8Q6 Gm11643-201ENSMUST00000119578 864 ntBASIC29.18■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms