Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4lE9Q2N0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4lE9Q2N0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Cpsf4lE9Q2N0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf4lE9Q2N0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf4lE9Q2N0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cpsf4lE9Q2N0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4lE9Q2N0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf4lE9Q2N0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.24■□□□□ 0.19
Cpsf4lE9Q2N0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf4lE9Q2N0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms