Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdr1E9Q0B4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdr1E9Q0B4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdr1E9Q0B4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdr1E9Q0B4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdr1E9Q0B4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Gm14523-201ENSMUST00000117260 558 ntBASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.91■□□□□ 0.62
Cdr1E9Q0B4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdr1E9Q0B4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Cdr1E9Q0B4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdr1E9Q0B4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cdr1E9Q0B4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdr1E9Q0B4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdr1E9Q0B4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cdr1E9Q0B4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms