Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh17E9PXF0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh17E9PXF0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh17E9PXF0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh17E9PXF0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.81■□□□□ 0.44
Pcdh17E9PXF0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh17E9PXF0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh17E9PXF0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh17E9PXF0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh17E9PXF0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh17E9PXF0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Gm13146-201ENSMUST00000118508 780 ntBASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh17E9PXF0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh17E9PXF0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Pcdh17E9PXF0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Pcdh17E9PXF0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Gm27011-201ENSMUST00000182352 972 ntBASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh17E9PXF0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms