Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2acC0HKE2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2acC0HKE2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2acC0HKE2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Hist1h2acC0HKE2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2acC0HKE2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hist1h2acC0HKE2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hist1h2acC0HKE2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist1h2acC0HKE2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist1h2acC0HKE2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Gm13241-201ENSMUST00000094493 780 ntBASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist1h2acC0HKE2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms