Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ptchd4B9EKX1 Gm10653-202ENSMUST00000139570 835 ntBASIC20.73■□□□□ 0.91
Ptchd4B9EKX1 Gm5408-201ENSMUST00000197998 747 ntBASIC20.73■□□□□ 0.91
Ptchd4B9EKX1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptchd4B9EKX1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ptchd4B9EKX1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.73■□□□□ 0.91
Ptchd4B9EKX1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd4B9EKX1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd4B9EKX1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
Ptchd4B9EKX1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Gm12527-201ENSMUST00000117967 564 ntBASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd4B9EKX1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.68■□□□□ 0.9
Ptchd4B9EKX1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd4B9EKX1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd4B9EKX1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms