Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm12887B1AVM1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm12887B1AVM1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm12887B1AVM1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm12887B1AVM1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm12887B1AVM1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm12887B1AVM1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12887B1AVM1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12887B1AVM1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Gm45444-201ENSMUST00000211394 898 ntBASIC15.49■□□□□ 0.07
Gm12887B1AVM1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms