Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc25a53A2AF28 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc25a53A2AF28 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc25a53A2AF28 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc25a53A2AF28 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc25a53A2AF28 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc25a53A2AF28 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.11■□□□□ 0.33
Slc25a53A2AF28 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Gm38205-201ENSMUST00000192243 258 ntBASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc25a53A2AF28 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Gm29257-201ENSMUST00000186115 639 ntBASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc25a53A2AF28 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.08■□□□□ 0.33
Slc25a53A2AF28 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Gm10602-201ENSMUST00000098239 609 ntBASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc25a53A2AF28 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Gm13534-201ENSMUST00000121169 513 ntBASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Gm7860-201ENSMUST00000121190 879 ntBASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc25a53A2AF28 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc25a53A2AF28 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc25a53A2AF28 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc25a53A2AF28 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc25a53A2AF28 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc25a53A2AF28 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc25a53A2AF28 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc25a53A2AF28 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms