Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm20049-201ENSMUST00000219950 730 ntBASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Gm3854A0A1B0GSS6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.27■□□□□ 0.68
Gm3854A0A1B0GSS6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3854A0A1B0GSS6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3854A0A1B0GSS6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm13168-201ENSMUST00000121771 632 ntBASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.25■□□□□ 0.67
Gm3854A0A1B0GSS6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3854A0A1B0GSS6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.23■□□□□ 0.67
Gm3854A0A1B0GSS6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3854A0A1B0GSS6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm3854A0A1B0GSS6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms