Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc194A0A140LIT1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc194A0A140LIT1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc194A0A140LIT1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc194A0A140LIT1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc194A0A140LIT1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc194A0A140LIT1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Gm9847-201ENSMUST00000052528 599 ntBASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc194A0A140LIT1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ccdc194A0A140LIT1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ccdc194A0A140LIT1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc194A0A140LIT1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.02■□□□□ 0.63
Ccdc194A0A140LIT1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.02■□□□□ 0.63
Ccdc194A0A140LIT1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms