Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
Ighv9-3A0A0B4J1J5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm42778-201ENSMUST00000199644 553 ntBASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv9-3A0A0B4J1J5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Gm42642-201ENSMUST00000200683 355 ntBASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.91■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv9-3A0A0B4J1J5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv9-3A0A0B4J1J5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms