Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-4A0A075B6B4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav6-4A0A075B6B4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-4A0A075B6B4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Gm27801-201ENSMUST00000184174 223 ntBASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-4A0A075B6B4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-4A0A075B6B4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Notumos-201ENSMUST00000151998 2659 ntBASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-4A0A075B6B4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms