Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav16A0A075B653 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.82□□□□□ -0.04
Trav16A0A075B653 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.81□□□□□ -0.04
Trav16A0A075B653 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16A0A075B653 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav16A0A075B653 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.8□□□□□ -0.04
Trav16A0A075B653 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16A0A075B653 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16A0A075B653 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.78□□□□□ -0.04
Trav16A0A075B653 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.78□□□□□ -0.04
Trav16A0A075B653 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trav16A0A075B653 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16A0A075B653 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16A0A075B653 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16A0A075B653 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16A0A075B653 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms