Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-2A0A075B638 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav4-2A0A075B638 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav4-2A0A075B638 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav4-2A0A075B638 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-2A0A075B638 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-2A0A075B638 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Gm11175-201ENSMUST00000116172 543 ntBASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.18■□□□□ 0.02
Trav4-2A0A075B638 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 167.7 ms