Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-55A0A075B5W6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-55A0A075B5W6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-55A0A075B5W6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm43060-201ENSMUST00000200621 289 ntBASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-55A0A075B5W6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ighv1-55A0A075B5W6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ighv1-55A0A075B5W6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.1■□□□□ 0.01
Ighv1-55A0A075B5W6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ighv1-55A0A075B5W6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms