Protein–RNA interactions for Protein: S4R299

Zfp236, Zinc finger protein 236, mousemouse

Predictions only

Length 1,847 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp236S4R299 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp236S4R299 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.23■□□□□ 0.83
Zfp236S4R299 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Zfp236S4R299 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp236S4R299 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.22■□□□□ 0.83
Zfp236S4R299 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.22■□□□□ 0.83
Zfp236S4R299 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.22■□□□□ 0.83
Zfp236S4R299 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp236S4R299 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Zfp236S4R299 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Zfp236S4R299 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp236S4R299 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Zfp236S4R299 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp236S4R299 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.2■□□□□ 0.82
Zfp236S4R299 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.2■□□□□ 0.82
Zfp236S4R299 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Zfp236S4R299 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp236S4R299 Mir5133-201ENSMUST00000174955 77 ntBASIC20.2■□□□□ 0.82
Zfp236S4R299 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Zfp236S4R299 Gm4968-201ENSMUST00000071458 858 ntBASIC20.2■□□□□ 0.82
Zfp236S4R299 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp236S4R299 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp236S4R299 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Zfp236S4R299 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Zfp236S4R299 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.19■□□□□ 0.82
Zfp236S4R299 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp236S4R299 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.19■□□□□ 0.82
Zfp236S4R299 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Zfp236S4R299 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp236S4R299 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp236S4R299 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.18■□□□□ 0.82
Zfp236S4R299 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp236S4R299 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.17■□□□□ 0.82
Zfp236S4R299 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.16■□□□□ 0.82
Zfp236S4R299 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.16■□□□□ 0.82
Zfp236S4R299 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Zfp236S4R299 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp236S4R299 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp236S4R299 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp236S4R299 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Zfp236S4R299 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp236S4R299 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.15■□□□□ 0.82
Zfp236S4R299 Gm7514-201ENSMUST00000209475 934 ntBASIC20.15■□□□□ 0.82
Zfp236S4R299 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp236S4R299 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp236S4R299 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp236S4R299 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.15■□□□□ 0.82
Zfp236S4R299 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Zfp236S4R299 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.14■□□□□ 0.81
Zfp236S4R299 Gm13146-201ENSMUST00000118508 780 ntBASIC20.14■□□□□ 0.81
Zfp236S4R299 Gm38205-201ENSMUST00000192243 258 ntBASIC20.14■□□□□ 0.81
Zfp236S4R299 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Zfp236S4R299 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp236S4R299 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Zfp236S4R299 Gm7860-201ENSMUST00000121190 879 ntBASIC20.13■□□□□ 0.81
Zfp236S4R299 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp236S4R299 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
Zfp236S4R299 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp236S4R299 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms