Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf3Q9Z2L7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Crlf3Q9Z2L7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Crlf3Q9Z2L7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crlf3Q9Z2L7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf3Q9Z2L7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Crlf3Q9Z2L7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Crlf3Q9Z2L7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf3Q9Z2L7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf3Q9Z2L7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms