Protein–RNA interactions for Protein: Q9Z179

Shcbp1, SHC SH2 domain-binding protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1Q9Z179 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1Q9Z179 Golph3-205ENSMUST00000228671 2842 ntBASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1Q9Z179 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1Q9Z179 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shcbp1Q9Z179 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shcbp1Q9Z179 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Shcbp1Q9Z179 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shcbp1Q9Z179 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shcbp1Q9Z179 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1Q9Z179 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shcbp1Q9Z179 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms