Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcb1Q9Z0H3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gm7290-201ENSMUST00000104990 617 ntBASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gm12918-201ENSMUST00000120234 636 ntBASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gm15710-201ENSMUST00000121821 636 ntBASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Gm5075-201ENSMUST00000196916 622 ntBASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smarcb1Q9Z0H3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcb1Q9Z0H3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Mir5133-201ENSMUST00000174955 77 ntBASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcb1Q9Z0H3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcb1Q9Z0H3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcb1Q9Z0H3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcb1Q9Z0H3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smarcb1Q9Z0H3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcb1Q9Z0H3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcb1Q9Z0H3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcb1Q9Z0H3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcb1Q9Z0H3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcb1Q9Z0H3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcb1Q9Z0H3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smarcb1Q9Z0H3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smarcb1Q9Z0H3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms