Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx9Q9WUH2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Lhx9Q9WUH2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lhx9Q9WUH2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.39■□□□□ 0.53
Lhx9Q9WUH2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Gm27801-201ENSMUST00000184174 223 ntBASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx9Q9WUH2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx9Q9WUH2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx9Q9WUH2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx9Q9WUH2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx9Q9WUH2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx9Q9WUH2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx9Q9WUH2 Gm13234-201ENSMUST00000120010 747 ntBASIC18.33■□□□□ 0.52
Lhx9Q9WUH2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx9Q9WUH2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx9Q9WUH2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.33■□□□□ 0.52
Lhx9Q9WUH2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx9Q9WUH2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.32■□□□□ 0.52
Lhx9Q9WUH2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.31■□□□□ 0.52
Lhx9Q9WUH2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx9Q9WUH2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx9Q9WUH2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx9Q9WUH2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lhx9Q9WUH2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms