Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.9□□□□□ -0.02
CcsQ9WU84 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CcsQ9WU84 Etf1-202ENSMUST00000180351 108 ntBASIC14.9□□□□□ -0.02
CcsQ9WU84 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.9□□□□□ -0.02
CcsQ9WU84 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.9□□□□□ -0.02
CcsQ9WU84 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.9□□□□□ -0.02
CcsQ9WU84 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CcsQ9WU84 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Gm10399-202ENSMUST00000202768 748 ntBASIC14.89□□□□□ -0.03
CcsQ9WU84 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.89□□□□□ -0.03
CcsQ9WU84 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CcsQ9WU84 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CcsQ9WU84 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CcsQ9WU84 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CcsQ9WU84 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.88□□□□□ -0.03
CcsQ9WU84 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.88□□□□□ -0.03
CcsQ9WU84 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CcsQ9WU84 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CcsQ9WU84 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.88□□□□□ -0.03
CcsQ9WU84 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.88□□□□□ -0.03
CcsQ9WU84 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CcsQ9WU84 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CcsQ9WU84 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CcsQ9WU84 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.87□□□□□ -0.03
CcsQ9WU84 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.87□□□□□ -0.03
CcsQ9WU84 Gm40881-201ENSMUST00000223397 166 ntBASIC14.87□□□□□ -0.03
CcsQ9WU84 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.87□□□□□ -0.03
CcsQ9WU84 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.87□□□□□ -0.03
CcsQ9WU84 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CcsQ9WU84 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CcsQ9WU84 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CcsQ9WU84 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CcsQ9WU84 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CcsQ9WU84 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Gm7417-201ENSMUST00000192950 473 ntBASIC14.86□□□□□ -0.03
CcsQ9WU84 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.86□□□□□ -0.03
CcsQ9WU84 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.86□□□□□ -0.03
CcsQ9WU84 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CcsQ9WU84 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CcsQ9WU84 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms