Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn8aQ9WTU3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn8aQ9WTU3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Scn8aQ9WTU3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Scn8aQ9WTU3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Scn8aQ9WTU3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn8aQ9WTU3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn8aQ9WTU3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.58■□□□□ 0.72
Scn8aQ9WTU3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn8aQ9WTU3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn8aQ9WTU3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn8aQ9WTU3 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn8aQ9WTU3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn8aQ9WTU3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Scn8aQ9WTU3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Scn8aQ9WTU3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn8aQ9WTU3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn8aQ9WTU3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.52■□□□□ 0.72
Scn8aQ9WTU3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Scn8aQ9WTU3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Scn8aQ9WTU3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn8aQ9WTU3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn8aQ9WTU3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms