Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp6ap1Q9R1Q9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp6ap1Q9R1Q9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp6ap1Q9R1Q9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp6ap1Q9R1Q9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp6ap1Q9R1Q9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atp6ap1Q9R1Q9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atp6ap1Q9R1Q9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atp6ap1Q9R1Q9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.83■□□□□ 0.61
Atp6ap1Q9R1Q9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.83■□□□□ 0.61
Atp6ap1Q9R1Q9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp6ap1Q9R1Q9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp6ap1Q9R1Q9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp6ap1Q9R1Q9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp6ap1Q9R1Q9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp6ap1Q9R1Q9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms