Protein–RNA interactions for Protein: Q9QY14

Foxe3, Forkhead box protein E3, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe3Q9QY14 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxe3Q9QY14 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Gm12896-201ENSMUST00000118430 226 ntBASIC20.7■□□□□ 0.9
Foxe3Q9QY14 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.7■□□□□ 0.9
Foxe3Q9QY14 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxe3Q9QY14 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.69■□□□□ 0.9
Foxe3Q9QY14 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Foxe3Q9QY14 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Foxe3Q9QY14 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.67■□□□□ 0.9
Foxe3Q9QY14 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxe3Q9QY14 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxe3Q9QY14 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxe3Q9QY14 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Foxe3Q9QY14 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxe3Q9QY14 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Gm5643-201ENSMUST00000117081 966 ntBASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxe3Q9QY14 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxe3Q9QY14 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Foxe3Q9QY14 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Gm7977-201ENSMUST00000193787 748 ntBASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxe3Q9QY14 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxe3Q9QY14 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxe3Q9QY14 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxe3Q9QY14 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxe3Q9QY14 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxe3Q9QY14 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.62■□□□□ 0.89
Foxe3Q9QY14 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxe3Q9QY14 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxe3Q9QY14 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxe3Q9QY14 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.61■□□□□ 0.89
Foxe3Q9QY14 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms