Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
Msh5Q9QUM7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Msh5Q9QUM7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Msh5Q9QUM7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh5Q9QUM7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh5Q9QUM7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh5Q9QUM7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.47■□□□□ 0.71
Msh5Q9QUM7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Msh5Q9QUM7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Msh5Q9QUM7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms