Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Golgb1-201ENSMUST00000023534 498 ntBASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rcl1Q9JJT0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rcl1Q9JJT0 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rcl1Q9JJT0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rcl1Q9JJT0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.15■□□□□ 0.18
Rcl1Q9JJT0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Rarb-207ENSMUST00000225921 2756 ntBASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Gm21956-201ENSMUST00000179946 522 ntBASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Gm7143-201ENSMUST00000222811 859 ntBASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rcl1Q9JJT0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rcl1Q9JJT0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rcl1Q9JJT0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rcl1Q9JJT0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rcl1Q9JJT0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rcl1Q9JJT0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms