Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rbfox1Q9JJ43 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rbfox1Q9JJ43 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Gm12922-201ENSMUST00000120626 809 ntBASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.36■□□□□ 0.21
Rbfox1Q9JJ43 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbfox1Q9JJ43 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbfox1Q9JJ43 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbfox1Q9JJ43 Rps24-207ENSMUST00000224568 714 ntBASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Golgb1-201ENSMUST00000023534 498 ntBASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.33■□□□□ 0.2
Rbfox1Q9JJ43 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbfox1Q9JJ43 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Serp2-204ENSMUST00000228055 705 ntBASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbfox1Q9JJ43 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.3■□□□□ 0.2
Rbfox1Q9JJ43 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms