Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Gm9847-201ENSMUST00000052528 599 ntBASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpxQ9JHS4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ClpxQ9JHS4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ClpxQ9JHS4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ClpxQ9JHS4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpxQ9JHS4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ClpxQ9JHS4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.49■□□□□ 0.39
ClpxQ9JHS4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpxQ9JHS4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.49■□□□□ 0.39
ClpxQ9JHS4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Gm7143-201ENSMUST00000222811 859 ntBASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Gm13241-201ENSMUST00000094493 780 ntBASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ClpxQ9JHS4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Gm12922-201ENSMUST00000120626 809 ntBASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Mir6236-201ENSMUST00000184437 123 ntBASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClpxQ9JHS4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpxQ9JHS4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpxQ9JHS4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms