Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Gm14523-201ENSMUST00000117260 558 ntBASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr3Q9DCF9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr3Q9DCF9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ssr3Q9DCF9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Gm27502-201ENSMUST00000183495 199 ntBASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Ssr3Q9DCF9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr3Q9DCF9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ssr3Q9DCF9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr3Q9DCF9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Gm7332-201ENSMUST00000118351 454 ntBASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr3Q9DCF9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.18■□□□□ 0.34
Ssr3Q9DCF9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr3Q9DCF9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr3Q9DCF9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr3Q9DCF9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms