Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.86■□□□□ 0.45
Cdc40Q9DC48 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Gm42569-201ENSMUST00000200539 472 ntBASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.86■□□□□ 0.45
Cdc40Q9DC48 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdc40Q9DC48 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdc40Q9DC48 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdc40Q9DC48 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdc40Q9DC48 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdc40Q9DC48 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cdc40Q9DC48 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Gm11421-201ENSMUST00000122124 294 ntBASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Gm42642-201ENSMUST00000200683 355 ntBASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdc40Q9DC48 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc40Q9DC48 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc40Q9DC48 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Cdc40Q9DC48 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdc40Q9DC48 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms