Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmg20aQ9DC33 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmg20aQ9DC33 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmg20aQ9DC33 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmg20aQ9DC33 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmg20aQ9DC33 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmg20aQ9DC33 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 BC021767-201ENSMUST00000126387 1716 ntBASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmg20aQ9DC33 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmg20aQ9DC33 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms