Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rrp8Q9DB85 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rrp8Q9DB85 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.92■□□□□ 0.62
Rrp8Q9DB85 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rrp8Q9DB85 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Gm13168-201ENSMUST00000121771 632 ntBASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Gm20049-201ENSMUST00000219950 730 ntBASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rrp8Q9DB85 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.89■□□□□ 0.62
Rrp8Q9DB85 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.89■□□□□ 0.62
Rrp8Q9DB85 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rrp8Q9DB85 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.88■□□□□ 0.61
Rrp8Q9DB85 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rrp8Q9DB85 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp8Q9DB85 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp8Q9DB85 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms