Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Gm40881-201ENSMUST00000223397 166 ntBASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nop56Q9D6Z1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nop56Q9D6Z1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nop56Q9D6Z1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.83■□□□□ 0.77
Nop56Q9D6Z1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nop56Q9D6Z1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.83■□□□□ 0.76
Nop56Q9D6Z1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nop56Q9D6Z1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nop56Q9D6Z1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nop56Q9D6Z1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nop56Q9D6Z1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nop56Q9D6Z1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Gm43530-201ENSMUST00000195920 274 ntBASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nop56Q9D6Z1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
Nop56Q9D6Z1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nop56Q9D6Z1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms