Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
5530400C23RikQ9D3I0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
5530400C23RikQ9D3I0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
5530400C23RikQ9D3I0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
5530400C23RikQ9D3I0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.91■□□□□ 0.62
5530400C23RikQ9D3I0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.91■□□□□ 0.62
5530400C23RikQ9D3I0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
5530400C23RikQ9D3I0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
5530400C23RikQ9D3I0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
5530400C23RikQ9D3I0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
5530400C23RikQ9D3I0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
5530400C23RikQ9D3I0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Gm26833-201ENSMUST00000180899 440 ntBASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.88■□□□□ 0.61
5530400C23RikQ9D3I0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
5530400C23RikQ9D3I0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
5530400C23RikQ9D3I0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
5530400C23RikQ9D3I0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
5530400C23RikQ9D3I0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
5530400C23RikQ9D3I0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
5530400C23RikQ9D3I0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
5530400C23RikQ9D3I0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
5530400C23RikQ9D3I0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
5530400C23RikQ9D3I0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
5530400C23RikQ9D3I0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
5530400C23RikQ9D3I0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms