Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chaf1bQ9D0N7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chaf1bQ9D0N7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chaf1bQ9D0N7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1bQ9D0N7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1bQ9D0N7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1bQ9D0N7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1bQ9D0N7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1bQ9D0N7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms